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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1853285_1854605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1853285 - 1854605

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTCCAA

U12 Branch Point Sequence:

CTGGGTCCAAGG

Flanking Amino Acid:

FYLEVGHLSQDRDFIMTFNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

69.7

41.3

Major BPS

44.1

-0.3

1.4

50.2

45.2

Major PPT

78.7

0.65

0.7

72.7

25.4

Minor 5ss

39.1

-1.2

51.7

Minor BPS

31.5

-1.5

2.1

30.95

41.8

Associated Gene:

Gene:

NKAIN1

Ensembl Gene ID:

ENSAPLG00000029636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031851

1832549 - 1860870

28322