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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1855523_1857726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1855523 - 1857726

Intron Length:

2204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCTTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GCTCACCCCACT

Flanking Amino Acid:

SKVFLEEEDSFDFIGGFDSY

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

76.3

0.59

0.7

68.4

31.9

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

38.9

-0.7

2.2

56.6

44.9

Associated Gene:

Gene:

NKAIN1

Ensembl Gene ID:

ENSAPLG00000029636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031851

1832549 - 1860870

28322