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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1857809_1859579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1857809 - 1859579

Intron Length:

1771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

CTTTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CAGCCCTCATGC

Flanking Amino Acid:

TSHLQLQPLYTSG*

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

72.2

39.5

Major BPS

0.5

1.1

71.2

35.2

Major PPT

77.9

0.63

0.8

69.4

36.9

Minor 5ss

32.2

-2

3.3

39.4

39.8

Minor BPS

41.4

-0.6

45.08

Associated Gene:

Gene:

NKAIN1

Ensembl Gene ID:

ENSAPLG00000029636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031851

1832549 - 1860870

28322