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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1894956_1904189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1894956 - 1904189

Intron Length:

9234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LALEGRAMGEQLLPGKKFWE

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.8

82.6

32.6

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609