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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1904299_1906910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1904299 - 1906910

Intron Length:

2612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTCAA

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTTATAAGAATT

Flanking Amino Acid:

QWRDSAWGTSDHSVSQPIMV

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

42.7

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

84.9

0.78

0.9

76.9

42.1

Minor 5ss

37.7

-1.4

3.1

49.3

46.9

Minor BPS

43.6

-0.4

1.9

63.47

40.6

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609