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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1907090_1909218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1907090 - 1909218

Intron Length:

2129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTCTTTTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GCTTATTAAAAT

Flanking Amino Acid:

GDSCLRKGGFGPRDAENDEN

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.6

0.53

0.9

68.4

37.4

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

48.3

-0

1.9

66.63

43.9

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609