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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1909386_1910354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1909386 - 1910354

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGGAT

U12 Branch Point Sequence:

TGCCCAGTGACG

Flanking Amino Acid:

NGIDTDVKDFSRTPGNCQNS

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

54.8

0.12

1.4

55.1

42.1

Major PPT

76.6

0.6

0.9

31.9

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

42.9

-0.7

2.3

50.16

43.7

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609