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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1910626_1916263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1910626 - 1916263

Intron Length:

5638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTAC

5'SS Class:

major

3'SS Sequence:

TTTGTCCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCTAT

U12 Branch Point Sequence:

AGGATCCTATTT

Flanking Amino Acid:

GLFDYNSQQQLFQRPNALAV

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

37.3

Major BPS

0.25

1.2

58.5

Major PPT

0.79

0.7

82.1

29.9

Minor 5ss

42.6

-0.8

3.2

58.3

46.6

Minor BPS

43.5

-0.4

1.8

56.16

40.3

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609