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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1916358_1917722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1916358 - 1917722

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTACTGACA

Flanking Amino Acid:

ALAAAHQPHIGLAPAAFVPN

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.8

0.56

71.2

Minor 5ss

37.8

-1.4

49.8

46.4

Minor BPS

55.4

0.16

1.9

76.2

34.1

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609