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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1923200_1926342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1923200 - 1926342

Intron Length:

3143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TCGAGCTAAACA

Flanking Amino Acid:

TQQTQQGQQQVLRGGASQRP

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

86.2

0.82

0.8

84.7

30.2

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

47.7

-0.1

2.1

59.37

46.5

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609