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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1931471_1936524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1931471 - 1936524

Intron Length:

5054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTATGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTGAACC

Flanking Amino Acid:

SHGSSSSLNLGGLTNGSGRY

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.4

0.68

0.9

73.9

36.5

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

62.6

0.38

1.4

68.84

36.8

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609