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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1942592_1943996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1942592 - 1943996

Intron Length:

1405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CGTCCTTTTATT

Flanking Amino Acid:

VLVLSQHKFASNVVEKCVTH

Intron Amino Acid Position:

1081

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.5

0.8

0.9

37.5

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

55.2

0.24

1.6

69.82

41.3

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609