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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1944190_1946795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1944190 - 1946795

Intron Length:

2606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAA

U12 Branch Point Sequence:

CCAACCCCAACC

Flanking Amino Acid:

PSQRKIVMHKIRPHIATLRK

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

47.5

-0.1

1.3

40.2

Major PPT

77.8

0.62

0.8

70.3

36.4

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

45.8

-0.3

1.9

53.2

43.8

Associated Gene:

Gene:

PUM1

Ensembl Gene ID:

ENSAPLG00000009351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009800

1880319 - 1947927

67609