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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1981571_1981981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1981571 - 1981981

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TCCCCCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCTGCCTCACCC

Flanking Amino Acid:

DDVYSGSGSGYFEQESGLET

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.6

40.2

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

79.9

0.67

0.7

76.5

25.5

Minor 5ss

33.5

-1.9

2.8

46.7

41.7

Minor BPS

47.8

-0.1

57.89

47.1

Associated Gene:

Gene:

SDC3

Ensembl Gene ID:

ENSAPLG00000020532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031089

1981222 - 1985657

4436

ENSAPLT00000028595

1981222 - 1985116

3895