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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1982596_1983876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1982596 - 1983876

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTCCAC

U12 Branch Point Sequence:

CGCTGCTCCACT

Flanking Amino Acid:

TTLPPTEAPQVEPGEVSTVL

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

44.9

-0.3

1.4

52.1

43.1

Major PPT

83.2

0.75

0.7

76.2

32.4

Minor 5ss

30.3

-2.3

3.5

Minor BPS

43.7

-0.4

2.3

60.32

48.9

Associated Gene:

Gene:

SDC3

Ensembl Gene ID:

ENSAPLG00000020532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031089

1981222 - 1985657

4436

ENSAPLT00000028595

1981222 - 1985116

3895