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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2037248_2042142_F

Intron Information:

Intron Rank:

129174

Intron Class:

major

Intron Phase:

Intron Coordinates:

2037248 - 2042142

Intron Length:

4895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

83.9

30.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.3

0.84

0.7

82.2

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

56.7

0.29

1.6

70.24

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029977

2037149 - 2043700

6552