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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2037248_2043822_F

Intron Information:

Intron Rank:

129175

Intron Class:

major

Intron Phase:

Intron Coordinates:

2037248 - 2043822

Intron Length:

6575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTATTATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

83.9

30.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

86.1

0.81

0.7

80.9

29.8

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

55.1

0.24

1.6

72.63

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035530

2036802 - 2044293

7492