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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2048452_2051275_F

Intron Information:

Intron Rank:

135433

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2048452 - 2051275

Intron Length:

2824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGATCA

5'SS Class:

major

3'SS Sequence:

TAAAATTAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTCTAAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.4

34.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

58.8

0.2

1.1

56.6

46.9

Minor 5ss

32.3

-2

2.9

31.5

42.2

Minor BPS

53.7

0.19

1.9

76.08

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048016

2048326 - 2051551

3226