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Intron Name: Anas_platyrhynchos_platyrhynchos_24_211863_392097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

211863 - 392097

Intron Length:

180235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGGC

5'SS Class:

major

3'SS Sequence:

TTCTGCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATAAAGTTAATA

Flanking Amino Acid:

QPLCWSENNEVKQIEKRDSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.6

37.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

83.8

0.76

0.8

81.1

Minor 5ss

30.1

-2.3

3.4

41.8

Minor BPS

47.2

-0.2

2.2

60.61

39.1

Associated Gene:

Gene:

DNAJC8

Ensembl Gene ID:

ENSAPLG00000003576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029446

211818 - 406228

194411

ENSAPLT00000003669

211818 - 406228

194411