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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2198576_2199274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2198576 - 2199274

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

ACAGAAATAACT

Flanking Amino Acid:

SFNLLLGVVKNRERLLIPFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

61.3

0.28

30.6

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

42.9

-0.4

58.7

43.5

Associated Gene:

Gene:

LAPTM5

Ensembl Gene ID:

ENSAPLG00000009157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009548

2180523 - 2204828

24306