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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2200041_2200577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2200041 - 2200577

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

CCTCTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

AAGTGTTTGACT

Flanking Amino Acid:

YLSLKSSDNGGFLPTLEKLS

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

83.3

0.75

0.7

78.5

27.2

Minor 5ss

32.6

-2

3.5

40.1

Minor BPS

55.1

0.24

1.8

69.63

41.7

Associated Gene:

Gene:

LAPTM5

Ensembl Gene ID:

ENSAPLG00000009157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009548

2180523 - 2204828

24306