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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2226887_2227141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2226887 - 2227141

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACGTAAT

5'SS Class:

major

3'SS Sequence:

TATTTTGCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCATATTT

Flanking Amino Acid:

TLNNDGKTCSACSGGSGSAL

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.5

37.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.8

0.76

0.9

81.6

35.8

Minor 5ss

36.8

-1.5

3.1

51.4

45.2

Minor BPS

48.5

-0

1.9

69.66

41.7

Associated Gene:

Gene:

MATN1

Ensembl Gene ID:

ENSAPLG00000008828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009203

2214655 - 2232865

18211