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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2356974_2379946_F

Intron Information:

Intron Rank:

130318

Intron Class:

major

Intron Phase:

Intron Coordinates:

2356974 - 2379946

Intron Length:

22973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAACC

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

TCTGCCATCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

72.5

37.3

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

83.9

0.76

0.7

76.9

31.7

Minor 5ss

36.1

-1.6

2.9

44.8

35.7

Minor BPS

52.5

0.16

2.2

76.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047993

2356506 - 2380284

23779