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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2401954_2402084_F

Intron Information:

Intron Rank:

132036

Intron Class:

major

Intron Phase:

Intron Coordinates:

2401954 - 2402084

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TAGTCCTACATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

74.1

0.54

1.1

73.6

41.2

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

51.6

0.13

2.1

72.56

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045552

2400836 - 2402289

1454