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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2539652_2542424_R

Intron Information:

Intron Rank:

147644

Intron Class:

major

Intron Phase:

Intron Coordinates:

2539652 - 2542424

Intron Length:

2773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCGGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GGAAATTTGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

80.2

34.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

69.5

0.44

60.9

40.2

Minor 5ss

31.4

-2.1

2.9

42.5

44.3

Minor BPS

46.4

-0.3

1.4

49.49

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041400

2537248 - 2548814

11567

ENSAPLT00000027129

2537248 - 2545725

8478