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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2761500_2762708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2761500 - 2762708

Intron Length:

1209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAC

U12 Branch Point Sequence:

CCCCCCTGGACT

Flanking Amino Acid:

SDYINANYIDGYHRSNHFIA

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

65.1

0.38

39.5

Major PPT

83.9

0.76

0.8

77.6

31.1

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

53.8

0.2

1.6

65.23

45.4

Associated Gene:

Gene:

PTPRU

Ensembl Gene ID:

ENSAPLG00000006899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007376

2747808 - 2787977

40170