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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2763405_2764564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2763405 - 2764564

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CTGTCCTCAGGT

Flanking Amino Acid:

EGYGFKQEYESFFEGWDASK

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

48.1

-0

2.1

67.86

48.6

Associated Gene:

Gene:

PTPRU

Ensembl Gene ID:

ENSAPLG00000006899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007376

2747808 - 2787977

40170