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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2776766_2777972_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2776766 - 2777972

Intron Length:

1207

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCTGGGCTT

5'SS Class:

major

3'SS Sequence:

CCCCCCGGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GTGTTCTGACTC

Flanking Amino Acid:

PHQPHQCSEKPMRAPKGLAF

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.3

64.4

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

44.6

-0.3

1.6

43.7

30.7

Minor 5ss

-3.1

4.3

39.6

40.3

Minor BPS

49.1

-0

1.7

59.2

40.3

Associated Gene:

Gene:

PTPRU

Ensembl Gene ID:

ENSAPLG00000006899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007376

2747808 - 2787977

40170