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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2780406_2781526_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2780406 - 2781526

Intron Length:

1121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCAGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TGCTCCTGAGCC

Flanking Amino Acid:

VSLFWPNEYQLPAPISSSRG

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

58.6

0.22

1.5

38.9

Major PPT

0.09

1.2

56.8

38.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

58.3

0.24

1.8

68.35

42.8

Associated Gene:

Gene:

PTPRU

Ensembl Gene ID:

ENSAPLG00000006899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007376

2747808 - 2787977

40170