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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2810589_2812092_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2810589 - 2812092

Intron Length:
1504

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGACTTCT

5'SS Class:
major

3'SS Sequence:
TGACCCCACACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTAAC

U12 Branch Point Sequence:
AGTGCCTTAACT

Flanking Amino Acid:
PLLVQDPARAGLKELEVPRL

Intron Amino Acid Position:
38

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.8
0.47
1.2
68.4
39.3

Major BPS
64.7
0.37
1.1
67.2
35.2

Major PPT
61.6
0.26
1
54.3
35.4

Minor 5ss
42.5
-0.8
2.8
50.9
45.6

Minor BPS
79
0.99
1.3
87.41
37.8

Associated Gene:

Gene:
MECR

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2810476 - 2816585
6110