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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2811819_2812092_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2811819 - 2812092

Intron Length:
274

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGCAAAG

5'SS Class:
major

3'SS Sequence:
TGACCCCACACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTAAC

U12 Branch Point Sequence:
AGTGCCTTAACT

Flanking Amino Acid:
GYGHSPWISVWLKELEVPRL

Intron Amino Acid Position:
31

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.1
0.24
1.2
55.2
43.7

Major BPS
64.7
0.37
1.1
67.2
35.2

Major PPT
61.6
0.26
1
54.3
35.4

Minor 5ss
37.1
-1.5
3.2
44.8
44.4

Minor BPS
79
0.99
1.3
87.41
37.8

Associated Gene:

Gene:
MECR

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2811727 - 2816585
4859