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Intron Name: Anas_platyrhynchos_platyrhynchos_24_28257_35420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28257 - 35420

Intron Length:

7164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TGCCTCTTACTT

Flanking Amino Acid:

DVLLVLGRLVLSCFELLLSI

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

69.2

0.48

37.1

Major PPT

86.6

0.82

0.7

84.3

30.5

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

55.1

0.24

1.6

69.3

42.1

Associated Gene:

Gene:

RLF

Ensembl Gene ID:

ENSAPLG00000011786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012274

23045 - 74585

51541