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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2825890_2826763_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2825890 - 2826763

Intron Length:
874

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGCACT

5'SS Class:
major

3'SS Sequence:
TCACCTCCTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
TGCTTGTCACCT

Flanking Amino Acid:
RRDSSYGSGRSGYGYRRSGR

Intron Amino Acid Position:
98

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
69.4
41.2

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
64.2
0.32
1
63.5
31.6

Minor 5ss
44.2
-0.6
2.9
64.9
39.9

Minor BPS
43.4
-0.4
2.4
63.97
46.4

Associated Gene:

Gene:
SRSF4

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2824463 - 2831180
6718