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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2837076_2850131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2837076 - 2850131

Intron Length:

13056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTACCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TCTTCTTTTACC

Flanking Amino Acid:

RAGPGRAGPPFFLNEFGMLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

0.77

0.8

78.2

29.4

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

71.1

0.65

1.6

78.32

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017011

2836962 - 2879797

42836