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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2850286_2853092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2850286 - 2853092

Intron Length:

2807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTACTTTAATA

Flanking Amino Acid:

ASAASSADLEVSKDNLPCSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.3

0.82

0.8

81.2

30.8

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

79.3

0.92

1.1

83.9

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017011

2836962 - 2879797

42836