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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2856635_2857896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2856635 - 2857896

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGCAGC

5'SS Class:

major

3'SS Sequence:

CTCTCCCACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTCTCCCACACA

Flanking Amino Acid:

PAAPLKLFREYQSFPQGRNG

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.3

59.2

45.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

70.8

0.47

0.8

64.9

29.6

Minor 5ss

34.7

-1.7

43.8

43.6

Minor BPS

44.5

-0.4

2.3

59.22

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836