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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2858002_2858656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2858002 - 2858656

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTTGCT

5'SS Class:

major

3'SS Sequence:

TCCCTGCTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATGAT

U12 Branch Point Sequence:

TGTTGTATGATC

Flanking Amino Acid:

SRFCVLTVAEVQGYRMRLHF

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

71.6

38.4

Major BPS

66.9

0.42

1.3

59.7

46.7

Major PPT

74.2

0.54

0.8

32.2

Minor 5ss

-1.8

3.5

50.4

Minor BPS

47.2

-0.2

62.83

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836