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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2859378_2860335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2859378 - 2860335

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TCCTGTTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CTTTCCTGATGT

Flanking Amino Acid:

PKSLFKTLSTPVTPSGFRLG

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.5

41.3

Major BPS

78.8

0.71

67.6

40.6

Major PPT

78.2

0.64

0.8

76.2

32.4

Minor 5ss

37.3

-1.4

3.4

59.1

45.4

Minor BPS

53.5

0.19

2.1

76.58

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836