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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2863686_2867725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2863686 - 2867725

Intron Length:

4040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCTTGTTTTACA

Flanking Amino Acid:

QAAPARAFKLRPAHGFQVNM

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

62.4

37.9

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

88.7

0.87

0.7

83.2

31.9

Minor 5ss

27.1

-2.6

3.1

28.8

37.6

Minor BPS

0.15

2.1

70.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836