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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2867837_2869018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2867837 - 2869018

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

TTAACTGTATCT

Flanking Amino Acid:

IIDKDDHRIKIHFDGWDHNY

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

70.8

39.3

Major BPS

69.7

0.49

59.9

38.5

Major PPT

76.1

0.59

0.9

73.8

36.9

Minor 5ss

40.7

-1

3.1

57.7

46.5

Minor BPS

48.3

-0

2.2

73.29

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836