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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2872344_2874968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2872344 - 2874968

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTGA

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

TCGCTCTGACTT

Flanking Amino Acid:

QMVKQENNGKDPDFDLQQAL

Intron Amino Acid Position:

682

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

Major BPS

65.8

0.39

57.3

39.4

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

47.1

-0.1

1.7

61.27

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027574

2853093 - 2884087

30995

ENSAPLT00000017011

2836962 - 2879797

42836