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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2875136_2879533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2875136 - 2879533

Intron Length:

4398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CATCTAATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TCTTCTTCTACA

Flanking Amino Acid:

KHVAKWTVEEVASFIQRLPG

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.7

83.6

22.5

Major BPS

85.7

0.89

0.8

22.2

Major PPT

69.8

0.44

0.9

62.7

37.1

Minor 5ss

-1.7

2.8

42.9

44.7

Minor BPS

57.4

0.22

1.9

71.31

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017011

2836962 - 2879797

42836

ENSAPLT00000027574

2853093 - 2884087

30995