Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_2927767_2941400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2927767 - 2941400

Intron Length:

13634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CGTTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTTTGTGTATC

Flanking Amino Acid:

NGQIPTGADGNMSDFLSRED

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

68.6

36.4

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

82.7

0.74

0.7

81.1

Minor 5ss

32.8

-2

2.6

34.8

34.3

Minor BPS

45.7

-0.3

2.4

66.38

39.6

Associated Gene:

Gene:

EPB41

Ensembl Gene ID:

ENSAPLG00000016409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046405

2922060 - 2968330

46271

ENSAPLT00000023943

2922060 - 2965483

43424