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Intron Name: Anas_platyrhynchos_platyrhynchos_24_2950175_2951392_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2950175 - 2951392

Intron Length:
1218

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAGCGG

5'SS Class:
major

3'SS Sequence:
AAACTCTTTCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTAAT

U12 Branch Point Sequence:
GCTTCACTAATG

Flanking Amino Acid:
KPADQFREKPAKHTLENFEM

Intron Amino Acid Position:
441

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.2
0.43
1.1
50.3
46

Major BPS
74.4
0.61
0.9
73.6
28.6

Major PPT
68.4
0.42
0.9
59.2
41.8

Minor 5ss
35.6
-1.6
3.3
47.2
48.2

Minor BPS
49.1
-0.2
2
58.16
43.4

Associated Gene:

Gene:
EPB41

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2922060 - 2965483
43424