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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3011963_3012125_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3011963 - 3012125

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGGAGCG

5'SS Class:

major

3'SS Sequence:

CCCAGCACGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTTGGCTCAGTT

Flanking Amino Acid:

AGERWAGATGPELNNVQENC

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

62.4

40.7

Major BPS

0.65

1.5

85.7

34.9

Major PPT

46.5

-0.2

1.1

37.6

33.5

Minor 5ss

18.6

-3.6

21.4

37.4

Minor BPS

43.8

-0.3

2.2

63.5

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002499

3011268 - 3016181

4914