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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3011971_3012151_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3011971 - 3012151

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

AGGGAGGACCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTTGGCTCAGTT

Flanking Amino Acid:

EENRFETAMAARKPELNNVQ

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

46.5

-0.2

1.1

28.2

41.1

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

43.8

-0.3

2.2

63.5

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028471

3011268 - 3020664

9397