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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3012404_3015744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3012404 - 3015744

Intron Length:

3341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

ATCGGCTCAGCT

Flanking Amino Acid:

KIHRGSGICLAHEGATCDLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

81.4

0.71

0.7

72.9

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

43.7

-0.4

2.2

62.25

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028471

3011268 - 3020664

9397

ENSAPLT00000002499

3011268 - 3016181

4914