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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3052512_3054874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3052512 - 3054874

Intron Length:

2363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TTGCCCTGATCT

Flanking Amino Acid:

MAASLWMGDLEPYMDENFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

75.7

34.4

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

85.1

0.79

0.7

81.1

30.9

Minor 5ss

33.2

-1.9

3.3

42.7

Minor BPS

59.5

0.38

1.8

78.69

43.1

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867