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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3054973_3055756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3054973 - 3055756

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACTCTT

5'SS Class:

major

3'SS Sequence:

TGTCTGTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AAATCCTTTTCT

Flanking Amino Acid:

SVKIIRNRLTGIPAGYCFVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

72.7

44.5

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

75.3

0.57

72.8

42.2

Minor 5ss

45.3

-0.5

2.9

59.5

44.9

Minor BPS

-0.3

3.6

72.7

43.7

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867