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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3055857_3058653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3055857 - 3058653

Intron Length:

2797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

AACATTTGAATG

Flanking Amino Acid:

NGKPLPGATPAKRFKLNYAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

78.9

0.65

0.9

76.1

37.8

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

46.3

-0.4

1.4

43.81

Associated Gene:

Gene:

TRNAU1AP

Ensembl Gene ID:

ENSAPLG00000002606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037096

3052485 - 3067351

14867

ENSAPLT00000002642

3052485 - 3067351

14867